MIABIS (Minimum Information About BIobank data Sharing)
a widely used standard model for biobanks, which is particularly relevant for software such as BioARCHIVE and its interoperability with other systems.
By integrating MIABIS into BioARCHIVE you can:
- Describe sample collections in a standardized way
- Enable interoperability with other biobanks (e.g. TMF, BBMRI)
- Deliver exports for research projects / cooperation partners
- Creating compatibility with EU-wide biobank directories
🔷 What is MIABIS?
MIABIS stands for:
Minimum Information About BIobank data Sharing
It is a data standard that was developed by BBMRI-ERIC (Biobanking and BioMolecular Resources Research Infrastructure – European Research Infrastructure Consortium) to describe biobank and sample metadata in a standardized way. The aim is to standardize, exchange and reuse biobank data within Europe and internationally.
Main objectives of MIABIS
- Standardization of information on biobanks, samples and donor data
- Facilitating the search and exchange of sample material
- Interoperability between different systems and countries
- Support of FAIR principles: Findable, Accessible, Interoperable, Reusable
MIABIS components (modules)
MIABIS consists of several modules that provide structured information on the following areas:
1. biobank module
- Name of the biobank
- Institution
- Location
- Contact
- Legal status (public/private)
- Admission requirements
2. collection module (sample collections)
- Sample type (e.g. blood, tissue, DNA)
- Collection method
- Processing & storage
- Disease reference
- Access restrictions
3rd sample module (single sample) – optional, for fine granular recording
- Aliquot information
- Storage conditions
- Barcode / ID
- Material type
4th donor module
- Age, gender
- State of health
- Ethnic origin (optional, data protection compliant)
- Consent (type, scope, validity)
Technical data model
MIABIS is formally described in JSON or OWL (Web Ontology Language) and follows a relational model that can be easily integrated into existing LIMS or biobank software.
- Example data model:
https://github.com/BBMRI-ERIC/miabis/blob/master/schema/json/miabis-collection-schema.json - Ontology version via BioPortal:
https://bioportal.bioontology.org/ontologies/MIABIS
Official sources
- BBMRI-ERIC MIABIS Hub:
https://github.com/BBMRI-ERIC/miabis
(Contains technical documentation and sample structures) - Publication on the standard:
MIABIS2.0 – A guideline for biobank metadata standardization - Integration in BBMRI Directory:
https://directory.bbmri-eric.eu
(Biobanks based on MIABIS are described here)